Ok, so what is the problem exactly ?
Under cutechess, you're not sure the net is loaded ? is that the issue ? If so, it is more on the cutechess side to allow the user to see debug information sooner.
If you think the net fail to load under cutechess (for example because you observe nps are too high), then i'd recommand to use full path and not rely on "working directory".
On the Minic log side. If you are using standard eval, you will see :
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info string This is Minic version 3.05 (NNUE available)
info string Info 2021-03-07 14:31:22-869: No NNUE net loaded, using standard evaluation
If net is correctly loaded :
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info string This is Minic version 3.05 (NNUE available)
info string Info 2021-03-07 14:31:03-930: Loading NNUE net ../NNUE-Nets/nibbled_nutshell.bin
If incompatible net is used :
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info string This is Minic version 3.05 (NNUE available)
info string Info 2021-03-07 14:29:34-894: Loading NNUE net ../NNUE-Nets/noisy_notch.bin
info string Error 2021-03-07 14:29:34-894: File ../NNUE-Nets/noisy_notch.bin does not look like a compatible net
info string Info 2021-03-07 14:29:34-894: Fail to load NNUE net, using standard evaluation
If path seems wrong :
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info string This is Minic version 3.05 (NNUE available)
info string Info 2021-03-07 14:31:40-102: Loading NNUE net ../NNUE-Nets/nibbled_nutshell___
info string Error 2021-03-07 14:31:40-102: File ../NNUE-Nets/nibbled_nutshell___ is not accessible
info string Info 2021-03-07 14:31:40-102: Fail to load NNUE net, using standard evaluation
But you need access to the log to verify that of course.